Inheritance diagram for DynamicFiberProp:

Public Member Functions
	DynamicFiberProp (const std::string &n)
	constructor

	~DynamicFiberProp ()
	destructor

Fiber *	newFiber () const
	return a Fiber with this property

void	clear ()
	set default values

void	read (Glossary &)
	set using a Glossary

void	complete (SimulProp const , PropertyList )
	check and derive parameter values

Property *	clone () const
	return a carbon copy of object

void	write_data (std::ostream &) const
	write

Public Member Functions inherited from FiberProp
	FiberProp (const std::string &n)
	constructor

	~FiberProp ()
	destructor

Fiber *	newFiber (Glossary &) const
	return a Fiber with this property, initialized

std::string	kind () const
	identifies the property

Public Member Functions inherited from Property
	Property (const std::string &n, const int index=-1)
	constructor must provide a name

virtual	~Property ()
	destructor

std::string	name () const
	return identifier for instantiation

void	name (const std::string &n)
	change name

bool	is_named (const std::string &n)
	true if 'name' matches

int	index () const
	index, unique among all Property of similar kind()

void	index (int x)
	set index in the array of Properties

bool	modified () const
	true if at least one value is different than its default setting

void	readString (std::string &, char stamp)
	set from a string, return number of values assigned More...

void	readFile (const char file[])
	set from a string, return number of values assigned

void	write_diff (std::ostream &, const Property *ref) const
	write only values that differ from the ones specified in ref

void	write_diff (std::ostream &, bool prune) const
	if ( prune == true ), write values that differ from the default values

void	write (std::ostream &, bool prune=false) const
	write header + data More...

Public Attributes
real	unit_length
	see DynamicFiber More...

real	growing_force
	Characteristic force for polymer assembly.

real	growing_speed [2]
	Speed of assembly.

real	hydrolysis_rate
	Hydrolysis rate of G-units, which defines the catastrophe rate.

real	shrinking_speed
	Speed of disassembly.

real	min_length
	Minimum authorized length. More...

Fate	fate
	Action that is taken when the fiber shrinks below min_length.

Public Attributes inherited from FiberProp
real	length
	length or initial-length for dynamic fibers

real	viscosity
	effective viscosity (if not specified, simul:viscosity is used)

unsigned int	binding_key
	can be set to control which Hands may bind More...

real	rigidity
	modulus for bending elasticity More...

real	segmentation
	desired distance between model points More...

real	total_polymer
	amount of polymer available for this type of fiber

real	hydrodynamic_radius [2]
	radius used to calculate mobility More...

bool	surface_effect
	if true, the mobility of a cylinder moving near a plane will be used More...

real	cylinder_height
	distance of fluid between slide and cylinder surface (set as `surface_effect`[1])

Confinement	confine
	set forces between fiber and Space [none, inside, outside, surface]

real	confine_stiff
	stiffness of confinement (set as `confine`[1])

std::string	confine_space
	name of space for confinement (set as `confine`[2])

int	steric
	if true, include steric interaction for this object

real	steric_radius
	radius of repulsive steric interaction (also known as `steric`[1])

real	steric_range
	extra radius of attractive steric interaction (also known as `steric`[2])

int	glue
	type of glue (interaction between fiber tip and Space)

std::string	glue_single
	name of Single used for glue (set a `glue`[1])

std::string	activity
	specialization More...

std::string	display
	display string (see Display parameters: Fibers)

FiberDisp *	disp
	display

Space const *	confine_space_ptr
	used for confinement

Friends
class	DynamicFiber

Additional Inherited Members
Static Public Member Functions inherited from Property
template<typename C >
static void	write_param (std::ostream &os, std::string const &name, C const &c)
	formatted output of one parameter

template<typename C >
static void	write_param (std::ostream &os, std::string const &name, C const *c, int cnt)
	formatted output of one parameter

template<typename C , typename D >
static void	write_param (std::ostream &os, std::string const &name, C const &c, D const &d)
	formatted output of one parameter

template<typename C , typename D , typename E >
static void	write_param (std::ostream &os, std::string const &name, C const &c, D const &d, E const &e)
	formatted output of one parameter

template<typename C , typename D , typename E , typename F >
static void	write_param (std::ostream &os, std::string const &name, C const &c, D const &d, E const &e, F const &f)
	formatted output of one parameter

Protected Attributes inherited from FiberProp
real	time_step
	local copy of SimulProp::time_step

real	free_polymer
	fraction in [0, 1]

real	total_length
	total length of fiber for this type

SingleSet *	glue_set
	SingleSet where glue are stored.

SingleProp *	glue_prop
	SingleProp used for glue.

Public Member Functions

Public Attributes

Friends

Additional Inherited Members